Submitted data error checks
0. Instructions for submitters
Submitters should use this file to check for problems with submitted data. Send either a list of problems or confirmation that everything looks OK to Sasha by email. Be sure to reference the dataset version and file creation date/time when doing so. These are:
## Version: 2.65## [1] "Date/time: 2025-08-10 22:04:05.102906"Each of these html files contains a summary of the data from a single submitted spreadsheet file. The html name is based on the name of the submitted file. Use the details below to check:
- Institute abbreviation, submitter and contributor names
- The plot location(s), using the map zoom and pan features if needed
- For problems in the first sections; “OK” means there are no problems in a particular section, “warning” is something that should be checked (but might be OK), “error” is a problem that needs to be addressed
- For numeric values outside the expected range in the “Value checks” section
- Variables with missing values–are there any missing that you thought you included?
- Plots of flux, cumulative emission over time, and final cumulative emission for strange patterns, unexpectedly high or low values
- Plots of weather data for appropriate differences between plots and expected diurnal or other patterns
- Plots of manure and application data for correct values
Finally, the numeric summary at the end might provide details that can help in pinpointing problems, but typically does not need to be checked.
1. Submitter
| inst.abbrev | submitter | version | date |
|---|---|---|---|
| UNITO DISAFA | Dela Pierre, Flavia | 1 | 2025-05-21 |
2. Contributors
| contributor | institute |
|---|---|
| Pedersen, Johanna | Aarhus University, Department of Biological and Chemical Engineering |
| Kamp, Jesper Nørlem | Aarhus University, Department of Biological and Chemical Engineering |
3. File and directory names
## [1] "../../data-submitted/03/UNITO-DISAFA"## [1] "../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx"4. Location
5.Keys and codes
Codes in Treatments sheet
## OK## OKCodes in Plots sheet
## OK## OKCodes in Emission sheet
## OK## OKCode merge check (matching project, experiment, field, plot, treatment)
## OK## OK## OK## OK## OK6. Publication info
Check for missing codes
## OK## OKComplete citations given
## OK## OK7. Emission sheet
Duplicated intervals
## OKMissing incorporation time
## OKDelay after application
## OKMissing or double interval number
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OKMissing time between intervals
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OKMeasurement method and units
Measurement technique:
| Method | Frequency |
|---|---|
| bLS | 240 |
| Dynamic chamber | 853 |
Measurement technique classification:
| Classification | Frequency |
|---|---|
| chamber | 853 |
| micro met | 240 |
Emission units and conversion factors.
| Original unit | Conversion factor applied | Final unit | |
|---|---|---|---|
| 1 | kg N/ha-hr | 1.0000000 | kg N/ha-hr |
| 587 | kg NH3/ha-hr | 0.8224414 | kg N/ha-hr |
7. Value checks
Check to see if submitted values are within a reasonable range.
Weather
## wind : OK
## rain.rate : OK
## air.temp : OK
## soil.temp : OK
## soil.temp.surf : No values to check.
## air.temp.z : OK
## wind.z : OKManure and application
## man.stor : No values to check.
## man.dm : OK
## man.vs : No values to check.
## man.tkn : OK
## man.tan : OK
## man.tic : No values to check.
## man.ua : No values to check.
## man.vfa : OK
## man.ph : OK
## app.rate : OK
## crop.z : OKEmission
## j.NH3 : OK
## e.int : OK
## e.rel : OK8. Missing values
Check for missing values.
All variables
## Some values missing:
## Table below has number of missing observations by variable:
## pub.id meas.tech.det soil.samp.z oc soil.type
## 1093 1093 1093 1093 1093
## soil.water.v soil.moist soil.ph crop.res man.source.det
## 1093 1093 1093 1093 1093
## man.bed man.trt2 man.trt3 man.stor man.vs
## 1093 1093 1093 1093 1093
## man.tic man.ua app.end time.incorp man.area
## 1093 1093 1093 1093 1093
## dist.inj furrow.z furrow.w crop.area lai
## 1093 1093 1093 1093 1093
## notes.plot app.end.orig bg.dl pH.surf soil.temp
## 1039 1093 1093 1093 853
## soil.temp.z soil.temp.surf rad wind MOL
## 853 1093 853 853 882
## ustar rl air.pres air.pres.unit rh
## 854 854 853 853 853
## wind.loc far.loc notes.int wind.2m pub.info
## 853 1093 1092 853 1093
## soil.type2 exper2 rep2
## 1093 1093 1093Application method and measurement method
## OK## OK9. Plots
Calculated cumulative emission
Cumulative emission. Missing values imputed (linear interpolation). Numeric labels show position of data in data file: row in the “Plots” sheet and first row in the “Emission” sheet. Labels in center of the first plot have measurement method, manure source, and application method. The same emission data are plotted a few different ways to facilitate checking for problems, e.g., comparing plot to each other or checking application dates. The same colors should be be used for particular field plots throughout this section.
Final cumulative emission
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Relative versus absolute emission
Flux
Weather data
## Warning: Removed 853 rows containing missing values or values outside the scale range
## (`geom_line()`).## Warning: Removed 853 rows containing missing values or values outside the scale range
## (`geom_point()`).
Manure and application
10. dfsumm summary
Plot-level data
##
## 17 rows and 214 columns
## 17 unique rows
## pub.id proj exper
## Class logical character character
## Minimum <NA> AM.VOC Fall24
## Maximum <NA> AM.VOC Fall24
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 0 1 1
## Missing values 17 0 0
## Sorted <NA> TRUE TRUE
##
## cpmid
## Class character
## Minimum D:1.I:UNITO DISAFA.Pr:AM.VOC.F:../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx.E:Fall24.F:Foulumgård.P:1.T:Machine plot DFC.R:1.R2:.T:2024-09-18 12:30:00.M:Dynamic chamberNA
## Maximum D:1.I:UNITO DISAFA.Pr:AM.VOC.F:../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx.E:Fall24.F:Foulumgård.P:8.T:Machine plot DFC.R:2.R2:.T:2024-09-18 12:30:00.M:Dynamic chamberNA
## Mean <NA>
## Unique (excld. NA) 17
## Missing values 0
## Sorted TRUE
##
## field plot rep plot.area lat long
## Class character numeric numeric numeric numeric numeric
## Minimum Foulumgård 1 1 0.38 56.5 9.56
## Maximum Foulumgård 20 4 732 56.5 9.56
## Mean <NA> 10.6 2.06 43.4 56.5 9.56
## Unique (excld. NA) 1 17 4 2 1 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE FALSE FALSE FALSE TRUE TRUE
##
## country topo soil.samp.z clay silt sand
## Class character character logical numeric numeric numeric
## Minimum DK Flat <NA> 9 24 65
## Maximum DK Flat <NA> 9 24 65
## Mean <NA> <NA> <NA> 9 24 65
## Unique (excld. NA) 1 1 0 1 1 1
## Missing values 0 0 17 0 0 0
## Sorted TRUE TRUE <NA> TRUE TRUE TRUE
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class logical logical numeric logical logical logical
## Minimum <NA> <NA> 0.23 <NA> <NA> <NA>
## Maximum <NA> <NA> 0.23 <NA> <NA> <NA>
## Mean <NA> <NA> 0.23 <NA> <NA> <NA>
## Unique (excld. NA) 0 0 1 0 0 0
## Missing values 17 17 0 17 17 17
## Sorted <NA> <NA> TRUE <NA> <NA> <NA>
##
## soil.dens crop.res till man.source man.source.det
## Class numeric logical character factor logical
## Minimum 1.1 <NA> No cat <NA>
## Maximum 1.1 <NA> No none <NA>
## Mean 1.1 <NA> <NA> pig <NA>
## Unique (excld. NA) 1 0 1 1 0
## Missing values 0 17 0 0 17
## Sorted TRUE <NA> TRUE TRUE <NA>
##
## man.bed man.con man.trt1 man.trt2 man.trt3 man.stor
## Class logical factor character logical logical logical
## Minimum <NA> slurry Acidification <NA> <NA> <NA>
## Maximum <NA> solid None <NA> <NA> <NA>
## Mean <NA> slurry <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 2 0 0 0
## Missing values 17 0 0 17 17 17
## Sorted <NA> TRUE FALSE <NA> <NA> <NA>
##
## man.dm man.vs man.tkn man.tan man.tic man.ua man.vfa
## Class numeric logical numeric numeric logical logical numeric
## Minimum 1.96 <NA> 2.42 2.32 <NA> <NA> 12.7
## Maximum 2.73 <NA> 3.04 2.51 <NA> <NA> 13.4
## Mean 2.16 <NA> 2.83 2.44 <NA> <NA> 13.1
## Unique (excld. NA) 5 0 5 5 0 0 5
## Missing values 0 17 0 0 17 17 0
## Sorted FALSE <NA> FALSE FALSE <NA> <NA> FALSE
##
## man.ph app.start app.end app.method
## Class numeric POSIXct, POSIXt POSIXct, POSIXt character
## Minimum 4.65 2024-09-18 12:30:00 <NA> bsth
## Maximum 7.59 2024-09-18 15:03:00 <NA> bsth
## Mean 6.41 2024-09-18 13:27:38 <NA> <NA>
## Unique (excld. NA) 5 13 0 1
## Missing values 0 0 17 0
## Sorted FALSE FALSE <NA> TRUE
##
## app.rate app.rate.unit incorp time.incorp man.area
## Class numeric character character numeric logical
## Minimum 35 t/ha none <NA> <NA>
## Maximum 35 t/ha none <NA> <NA>
## Mean 35 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 0 0
## Missing values 0 0 0 17 17
## Sorted TRUE TRUE TRUE <NA> <NA>
##
## dist.inj furrow.z furrow.w crop crop.z crop.area
## Class logical logical logical character numeric numeric
## Minimum <NA> <NA> <NA> grass 15 <NA>
## Maximum <NA> <NA> <NA> grass 15 <NA>
## Mean <NA> <NA> <NA> <NA> 15 <NA>
## Unique (excld. NA) 0 0 0 1 1 0
## Missing values 17 17 17 0 0 17
## Sorted <NA> <NA> <NA> TRUE TRUE <NA>
##
## lai notes.plot row.in.file.plot institute sub.period
## Class logical character numeric character numeric
## Minimum <NA> . 5 UNITO DISAFA 3
## Maximum <NA> . 21 UNITO DISAFA 3
## Mean <NA> <NA> 13 <NA> 3
## Unique (excld. NA) 0 1 17 1 1
## Missing values 17 16 0 0 0
## Sorted <NA> TRUE FALSE TRUE TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx
## Maximum ../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## treat meas.tech meas.tech.det app.start.orig
## Class character character logical character
## Minimum High acid DFC bLS <NA> 18-09-2024 12:30
## Maximum No acid DFC Dynamic chamber <NA> 18-09-2024 15:03
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 6 2 0 13
## Missing values 0 0 17 0
## Sorted FALSE FALSE <NA> FALSE
##
## app.end.orig
## Class logical
## Minimum <NA>
## Maximum <NA>
## Mean <NA>
## Unique (excld. NA) 0
## Missing values 17
## Sorted <NA>
##
## cpid
## Class character
## Minimum D:1.I:UNITO DISAFA.Pr:AM.VOC.F:../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx.E:Fall24.F:Foulumgård.P:1.T:Machine plot DFC.R:1.R2:.T:2024-09-18 12:30:00
## Maximum D:1.I:UNITO DISAFA.Pr:AM.VOC.F:../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx.E:Fall24.F:Foulumgård.P:8.T:Machine plot DFC.R:2.R2:.T:2024-09-18 12:30:00
## Mean <NA>
## Unique (excld. NA) 17
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot
## Class character character
## Minimum D:1.I:UNITO DISAFA.Pr:AM.VOC.E:Fall24
## Maximum D:1.I:UNITO DISAFA.Pr:AM.VOC.E:Fall24
## Mean <NA> <NA>
## Unique (excld. NA) 1 1
## Missing values 0 0
## Sorted TRUE TRUE
##
## submitter tan.app e.1 e.4 e.6 e.12
## Class character numeric numeric numeric numeric numeric
## Minimum Dela Pierre, Flavia 81.2 0.328 -0.0949 -0.098 -0.268
## Maximum Dela Pierre, Flavia 87.8 0.328 5.52 6.16 6.76
## Mean <NA> 85.2 0.328 0.991 1.19 1.3
## Unique (excld. NA) 1 5 1 17 17 17
## Missing values 0 0 16 0 0 0
## Sorted TRUE FALSE TRUE FALSE FALSE FALSE
##
## e.24 e.48 e.72 e.96 e.168 e.final e.tot
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum -0.491 -0.907 -1.39 -1.6 <NA> -1.77 -1.77
## Maximum 7.26 8.67 10.7 12.4 <NA> 13.4 13.4
## Mean 1.73 2.66 3.76 4.78 <NA> 5.88 5.88
## Unique (excld. NA) 17 17 17 17 0 17 17
## Missing values 0 0 0 0 17 0 0
## Sorted FALSE FALSE FALSE FALSE <NA> FALSE FALSE
##
## e.cum.1 e.cum.4 e.cum.6 e.cum.12 e.cum.24 e.cum.48 e.cum.72
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.328 -0.0949 -0.098 -0.268 -0.491 -0.907 -1.39
## Maximum 0.328 5.52 6.16 6.76 7.26 8.67 10.7
## Mean 0.328 0.991 1.19 1.3 1.73 2.66 3.76
## Unique (excld. NA) 1 17 17 17 17 17 17
## Missing values 16 0 0 0 0 0 0
## Sorted TRUE FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.cum.96 e.cum.168 e.cum.final e.cum.tot e.rel.1 e.rel.4
## Class numeric numeric numeric numeric numeric numeric
## Minimum -1.6 <NA> -1.77 -1.77 0.00376 -0.0011
## Maximum 12.4 <NA> 13.4 13.4 0.00376 0.0633
## Mean 4.78 <NA> 5.88 5.88 0.00376 0.0116
## Unique (excld. NA) 17 0 17 17 1 17
## Missing values 0 17 0 0 16 0
## Sorted FALSE <NA> FALSE FALSE TRUE FALSE
##
## e.rel.6 e.rel.12 e.rel.24 e.rel.48 e.rel.72 e.rel.96
## Class numeric numeric numeric numeric numeric numeric
## Minimum -0.00114 -0.00311 -0.0057 -0.0103 -0.0158 -0.0182
## Maximum 0.0707 0.0776 0.0833 0.0995 0.123 0.142
## Mean 0.014 0.0153 0.0203 0.0311 0.044 0.0558
## Unique (excld. NA) 17 17 17 17 17 17
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.rel.168 e.rel.final e.rel.tot rain.1 rain.4 rain.6
## Class numeric numeric numeric numeric numeric numeric
## Minimum <NA> -0.0201 -0.0201 0 0 0
## Maximum <NA> 0.154 0.154 0 0 0
## Mean <NA> 0.0687 0.0687 0 0 0
## Unique (excld. NA) 0 17 17 1 1 1
## Missing values 17 0 0 16 0 0
## Sorted <NA> FALSE FALSE TRUE TRUE TRUE
##
## rain.12 rain.24 rain.48 rain.72 rain.96 rain.168 rain.final
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0 0 0 0 <NA> 0
## Maximum 0 0 0 0 0 <NA> 0
## Mean 0 0 0 0 0 <NA> 0
## Unique (excld. NA) 1 1 1 1 1 0 1
## Missing values 0 0 0 0 0 17 0
## Sorted TRUE TRUE TRUE TRUE TRUE <NA> TRUE
##
## rain.tot air.temp.1 air.temp.4 air.temp.6 air.temp.12
## Class numeric numeric numeric numeric numeric
## Minimum 0 19.7 18.6 17 14.8
## Maximum 0 19.7 20 19.3 16.7
## Mean 0 19.7 19.6 18.4 15.7
## Unique (excld. NA) 1 1 5 7 9
## Missing values 0 16 0 0 0
## Sorted TRUE TRUE FALSE FALSE FALSE
##
## air.temp.24 air.temp.48 air.temp.72 air.temp.96 air.temp.168
## Class numeric numeric numeric numeric numeric
## Minimum 14.1 14.2 14.3 14.2 14.2
## Maximum 14.5 14.6 14.4 14.4 14.4
## Mean 14.3 14.4 14.4 14.3 14.3
## Unique (excld. NA) 13 16 17 17 17
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## air.temp.mn rain.rate.1 rain.rate.4 rain.rate.6 rain.rate.12
## Class numeric numeric numeric numeric numeric
## Minimum 14.2 0 0 0 0
## Maximum 14.4 0 0 0 0
## Mean 14.3 0 0 0 0
## Unique (excld. NA) 17 1 1 1 1
## Missing values 0 16 0 0 0
## Sorted FALSE TRUE TRUE TRUE TRUE
##
## rain.rate.24 rain.rate.48 rain.rate.72 rain.rate.96
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0 0 0
## Mean 0 0 0 0
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.168 rain.rate.mn soil.temp.1 soil.temp.4
## Class numeric numeric numeric numeric
## Minimum 0 0 14.6 14.9
## Maximum 0 0 14.6 14.9
## Mean 0 0 14.6 14.9
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 16 16
## Sorted TRUE TRUE TRUE TRUE
##
## soil.temp.6 soil.temp.12 soil.temp.24 soil.temp.48
## Class numeric numeric numeric numeric
## Minimum 15 15.1 14.9 15
## Maximum 15 15.1 14.9 15
## Mean 15 15.1 14.9 15
## Unique (excld. NA) 1 1 1 1
## Missing values 16 16 16 16
## Sorted TRUE TRUE TRUE TRUE
##
## soil.temp.72 soil.temp.96 soil.temp.168 soil.temp.mn wind.1
## Class numeric numeric numeric numeric numeric
## Minimum 15.1 15.2 15.2 15.2 1.99
## Maximum 15.1 15.2 15.2 15.2 1.99
## Mean 15.1 15.2 15.2 15.2 1.99
## Unique (excld. NA) 1 1 1 1 1
## Missing values 16 16 16 16 16
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## wind.4 wind.6 wind.12 wind.24 wind.48 wind.72 wind.96
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 2.06 1.92 1.34 0.998 1.11 1.16 1.09
## Maximum 2.06 1.92 1.34 0.998 1.11 1.16 1.09
## Mean 2.06 1.92 1.34 0.998 1.11 1.16 1.09
## Unique (excld. NA) 1 1 1 1 1 1 1
## Missing values 16 16 16 16 16 16 16
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE TRUE
##
## wind.168 wind.mn wind.2m.1 wind.2m.4 wind.2m.6 wind.2m.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 1.07 1.07 1.99 2.06 1.92 1.34
## Maximum 1.07 1.07 1.99 2.06 1.92 1.34
## Mean 1.07 1.07 1.99 2.06 1.92 1.34
## Unique (excld. NA) 1 1 1 1 1 1
## Missing values 16 16 16 16 16 16
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE
##
## wind.2m.24 wind.2m.48 wind.2m.72 wind.2m.96 wind.2m.168
## Class numeric numeric numeric numeric numeric
## Minimum 0.998 1.11 1.16 1.09 1.07
## Maximum 0.998 1.11 1.16 1.09 1.07
## Mean 0.998 1.11 1.16 1.09 1.07
## Unique (excld. NA) 1 1 1 1 1
## Missing values 16 16 16 16 16
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## wind.2m.mn rad.1 rad.4 rad.6 rad.12 rad.24 rad.48
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 1.07 555 433 319 160 169 141
## Maximum 1.07 555 433 319 160 169 141
## Mean 1.07 555 433 319 160 169 141
## Unique (excld. NA) 1 1 1 1 1 1 1
## Missing values 16 16 16 16 16 16 16
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE TRUE
##
## rad.72 rad.96 rad.168 rad.mn rh.1 rh.4 rh.6
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 145 148 141 141 60.6 60.4 64.6
## Maximum 145 148 141 141 60.6 60.4 64.6
## Mean 145 148 141 141 60.6 60.4 64.6
## Unique (excld. NA) 1 1 1 1 1 1 1
## Missing values 16 16 16 16 16 16 16
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE TRUE
##
## rh.12 rh.24 rh.48 rh.72 rh.96 rh.168 rh.mn
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 78.7 84.9 86.1 88.1 87.8 88.2 88.2
## Maximum 78.7 84.9 86.1 88.1 87.8 88.2 88.2
## Mean 78.7 84.9 86.1 88.1 87.8 88.2 88.2
## Unique (excld. NA) 1 1 1 1 1 1 1
## Missing values 16 16 16 16 16 16 16
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE TRUE
##
## first.row.in.file.int last.row.in.file.int n.ints dt1
## Class numeric numeric integer numeric
## Minimum 5 58 53 0.5
## Maximum 858 1100 240 2.53
## Mean 432 495 64.3 2.41
## Unique (excld. NA) 17 17 3 2
## Missing values 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE
##
## j.rel1 j.NH31 dt.min dt.max ct.min ct.max
## Class numeric numeric numeric numeric numeric numeric
## Minimum -0.00048 -0.0421 0.5 0.5 0.5 120
## Maximum 0.0222 1.94 2.52 2.53 2.53 137
## Mean 0.00343 0.292 2.32 2.41 2.41 134
## Unique (excld. NA) 17 17 3 2 2 3
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## t.start.p t.end.p air.temp.z
## Class POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 2024-09-18 12:30:00 2024-09-23 12:00:00 2
## Maximum 2024-09-18 15:03:00 2024-09-24 03:15:00 2
## Mean 2024-09-18 13:46:14 2024-09-24 01:19:03 2
## Unique (excld. NA) 17 17 1
## Missing values 0 0 0
## Sorted FALSE FALSE TRUE
##
## soil.temp.z wind.z wind.loc far.loc pub.info soil.type2
## Class numeric numeric character logical logical logical
## Minimum 0.1 2 Field <NA> <NA> <NA>
## Maximum 0.1 2 Field <NA> <NA> <NA>
## Mean 0.1 2 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 0 0 0
## Missing values 16 0 16 17 17 17
## Sorted TRUE TRUE TRUE <NA> <NA> <NA>
##
## exper2 rep2 acid meas.tech.orig
## Class logical logical logical character
## Minimum <NA> <NA> FALSE bLS
## Maximum <NA> <NA> TRUE Dynamic chamber
## Mean <NA> <NA> 0.705882352941177 TRUE <NA>
## Unique (excld. NA) 0 0 2 2
## Missing values 17 17 0 0
## Sorted <NA> <NA> FALSE FALSE
##
## meas.tech2 crop.orig app.method.orig
## Class character character character
## Minimum chamber Grass Band spread or trailing hose
## Maximum micro met Grass Band spread or trailing hose
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 2 1 1
## Missing values 0 0 0
## Sorted FALSE TRUE TRUE
##
## incorp.orig man.source.orig date.start
## Class character character Date
## Minimum None Pig 2024-09-18
## Maximum None Pig 2024-09-18
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
## Interval-level emission data
##
## 1093 rows and 137 columns
## 1093 unique rows
## cpmid
## Class character
## Minimum D:1.I:UNITO DISAFA.Pr:AM.VOC.F:../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx.E:Fall24.F:Foulumgård.P:1.T:Machine plot DFC.R:1.R2:.T:2024-09-18 12:30:00.M:Dynamic chamberNA
## Maximum D:1.I:UNITO DISAFA.Pr:AM.VOC.F:../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx.E:Fall24.F:Foulumgård.P:8.T:Machine plot DFC.R:2.R2:.T:2024-09-18 12:30:00.M:Dynamic chamberNA
## Mean <NA>
## Unique (excld. NA) 17
## Missing values 0
## Sorted TRUE
##
## pub.id proj exper field plot rep
## Class logical character character character numeric numeric
## Minimum <NA> AM.VOC Fall24 Foulumgård 1 1
## Maximum <NA> AM.VOC Fall24 Foulumgård 20 4
## Mean <NA> <NA> <NA> <NA> 12.2 1.87
## Unique (excld. NA) 0 1 1 1 17 4
## Missing values 1093 0 0 0 0 0
## Sorted <NA> TRUE TRUE TRUE FALSE FALSE
##
## treat meas.tech meas.tech.det plot.area
## Class character character logical numeric
## Minimum High acid DFC bLS <NA> 0.38
## Maximum No acid DFC Dynamic chamber <NA> 732
## Mean <NA> <NA> <NA> 161
## Unique (excld. NA) 6 2 0 2
## Missing values 0 0 1093 0
## Sorted FALSE FALSE <NA> FALSE
##
## lat long country topo soil.samp.z clay
## Class numeric numeric character character logical numeric
## Minimum 56.5 9.56 DK Flat <NA> 9
## Maximum 56.5 9.56 DK Flat <NA> 9
## Mean 56.5 9.56 <NA> <NA> <NA> 9
## Unique (excld. NA) 1 1 1 1 0 1
## Missing values 0 0 0 0 1093 0
## Sorted TRUE TRUE TRUE TRUE <NA> TRUE
##
## silt sand oc soil.type soil.water soil.water.v
## Class numeric numeric logical logical numeric logical
## Minimum 24 65 <NA> <NA> 0.23 <NA>
## Maximum 24 65 <NA> <NA> 0.23 <NA>
## Mean 24 65 <NA> <NA> 0.23 <NA>
## Unique (excld. NA) 1 1 0 0 1 0
## Missing values 0 0 1093 1093 0 1093
## Sorted TRUE TRUE <NA> <NA> TRUE <NA>
##
## soil.moist soil.ph soil.dens crop.res till man.source
## Class logical logical numeric logical character factor
## Minimum <NA> <NA> 1.1 <NA> No cat
## Maximum <NA> <NA> 1.1 <NA> No none
## Mean <NA> <NA> 1.1 <NA> <NA> pig
## Unique (excld. NA) 0 0 1 0 1 1
## Missing values 1093 1093 0 1093 0 0
## Sorted <NA> <NA> TRUE <NA> TRUE TRUE
##
## man.source.det man.bed man.con man.trt1 man.trt2
## Class logical logical factor character logical
## Minimum <NA> <NA> slurry Acidification <NA>
## Maximum <NA> <NA> solid None <NA>
## Mean <NA> <NA> slurry <NA> <NA>
## Unique (excld. NA) 0 0 1 2 0
## Missing values 1093 1093 0 0 1093
## Sorted <NA> <NA> TRUE FALSE <NA>
##
## man.trt3 man.stor man.dm man.vs man.tkn man.tan man.tic
## Class logical logical numeric logical numeric numeric logical
## Minimum <NA> <NA> 1.96 <NA> 2.42 2.32 <NA>
## Maximum <NA> <NA> 2.73 <NA> 3.04 2.51 <NA>
## Mean <NA> <NA> 2.13 <NA> 2.86 2.44 <NA>
## Unique (excld. NA) 0 0 5 0 5 5 0
## Missing values 1093 1093 0 1093 0 0 1093
## Sorted <NA> <NA> FALSE <NA> FALSE FALSE <NA>
##
## man.ua man.vfa man.ph app.start app.end
## Class logical numeric numeric POSIXct, POSIXt POSIXct, POSIXt
## Minimum <NA> 12.7 4.65 2024-09-18 12:30:00 <NA>
## Maximum <NA> 13.4 7.59 2024-09-18 15:03:00 <NA>
## Mean <NA> 13.1 6.61 2024-09-18 13:17:39 <NA>
## Unique (excld. NA) 0 5 5 13 0
## Missing values 1093 0 0 0 1093
## Sorted <NA> FALSE FALSE FALSE <NA>
##
## app.method app.rate app.rate.unit incorp time.incorp
## Class character numeric character character numeric
## Minimum bsth 35 t/ha none <NA>
## Maximum bsth 35 t/ha none <NA>
## Mean <NA> 35 <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0
## Missing values 0 0 0 0 1093
## Sorted TRUE TRUE TRUE TRUE <NA>
##
## man.area dist.inj furrow.z furrow.w crop crop.z
## Class logical logical logical logical character numeric
## Minimum <NA> <NA> <NA> <NA> grass 15
## Maximum <NA> <NA> <NA> <NA> grass 15
## Mean <NA> <NA> <NA> <NA> <NA> 15
## Unique (excld. NA) 0 0 0 0 1 1
## Missing values 1093 1093 1093 1093 0 0
## Sorted <NA> <NA> <NA> <NA> TRUE TRUE
##
## crop.area lai notes.plot row.in.file.plot institute
## Class numeric logical character numeric character
## Minimum <NA> <NA> . 5 UNITO DISAFA
## Maximum <NA> <NA> . 21 UNITO DISAFA
## Mean <NA> <NA> <NA> 14.3 <NA>
## Unique (excld. NA) 0 0 1 17 1
## Missing values 1093 1093 1039 0 0
## Sorted <NA> <NA> TRUE FALSE TRUE
##
## sub.period
## Class numeric
## Minimum 3
## Maximum 3
## Mean 3
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx
## Maximum ../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class character logical
## Minimum 18-09-2024 12:30 <NA>
## Maximum 18-09-2024 15:03 <NA>
## Mean <NA> <NA>
## Unique (excld. NA) 13 0
## Missing values 0 1093
## Sorted FALSE <NA>
##
## cpid
## Class character
## Minimum D:1.I:UNITO DISAFA.Pr:AM.VOC.F:../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx.E:Fall24.F:Foulumgård.P:1.T:Machine plot DFC.R:1.R2:.T:2024-09-18 12:30:00
## Maximum D:1.I:UNITO DISAFA.Pr:AM.VOC.F:../../data-submitted/03/UNITO-DISAFA/ALFAM2_AM.VOC_jk_jp_fd.xlsx.E:Fall24.F:Foulumgård.P:8.T:Machine plot DFC.R:2.R2:.T:2024-09-18 12:30:00
## Mean <NA>
## Unique (excld. NA) 17
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot
## Class character character
## Minimum D:1.I:UNITO DISAFA.Pr:AM.VOC.E:Fall24
## Maximum D:1.I:UNITO DISAFA.Pr:AM.VOC.E:Fall24
## Mean <NA> <NA>
## Unique (excld. NA) 1 1
## Missing values 0 0
## Sorted TRUE TRUE
##
## submitter tan.app interval t.start
## Class character numeric numeric POSIXct, POSIXt
## Minimum Dela Pierre, Flavia 81.2 1 2024-09-18 12:30:00
## Maximum Dela Pierre, Flavia 87.8 240 2024-09-24 03:15:00
## Mean <NA> 85.6 47.7 2024-09-21 06:20:02
## Unique (excld. NA) 1 5 240 1064
## Missing values 0 0 0 0
## Sorted TRUE FALSE FALSE FALSE
##
## t.end dt bg.dl bg.val bg.unit
## Class POSIXct, POSIXt numeric logical numeric character
## Minimum 2024-09-18 13:00:00 0.5 <NA> 0.0247 ppm
## Maximum 2024-09-24 05:47:00 2.53 <NA> 13.6 µg/m3
## Mean 2024-09-21 08:25:03 2.08 <NA> 0.879 <NA>
## Unique (excld. NA) 1064 5 0 294 2
## Missing values 0 0 1093 0 0
## Sorted FALSE FALSE <NA> FALSE FALSE
##
## j.type j.NH3 j.NH3.unit pH.surf air.temp air.temp.z
## Class character numeric character logical numeric numeric
## Minimum emission rate -0.0588 kg N/ha-hr <NA> 7.5 2
## Maximum emission rate 1.94 kg N/ha-hr <NA> 21.1 2
## Mean <NA> 0.0499 <NA> <NA> 14.2 2
## Unique (excld. NA) 1 1093 1 0 148 1
## Missing values 0 0 0 1093 0 0
## Sorted TRUE FALSE TRUE <NA> FALSE TRUE
##
## soil.temp soil.temp.z soil.temp.surf rad wind wind.z
## Class numeric numeric logical numeric numeric numeric
## Minimum 14.4 0.1 <NA> 0 0.0517 2
## Maximum 16.2 0.1 <NA> 566 2.56 2
## Mean 15.2 0.1 <NA> 141 1.07 2
## Unique (excld. NA) 36 1 0 147 240 1
## Missing values 853 853 1093 853 853 0
## Sorted FALSE TRUE <NA> FALSE FALSE TRUE
##
## MOL ustar rl air.pres air.pres.unit rain
## Class numeric numeric numeric numeric character numeric
## Minimum -967 0.00688 3.65e-10 1e+05 Pa 0
## Maximum 572 0.256 0.888 103000 Pa 0
## Mean -12 0.113 0.0842 102000 <NA> 0
## Unique (excld. NA) 175 239 237 240 1 1
## Missing values 882 854 854 853 853 0
## Sorted FALSE FALSE FALSE FALSE TRUE TRUE
##
## rh wind.loc far.loc notes.int row.in.file.int
## Class numeric character logical character numeric
## Minimum 57.3 Field <NA> . 5
## Maximum 98.5 Field <NA> . 1100
## Mean 88.2 <NA> <NA> <NA> 551
## Unique (excld. NA) 164 1 0 1 1093
## Missing values 853 853 1093 1092 0
## Sorted FALSE TRUE <NA> TRUE FALSE
##
## t.start.orig t.end.orig j.NH3.orig j.NH3.conv.fact
## Class character character numeric numeric
## Minimum 18-09-2024 12:30 18-09-2024 12:30 -0.0588 0.822
## Maximum 24-09-2024 03:15 24-09-2024 03:15 1.94 1
## Mean <NA> <NA> 0.0542 0.952
## Unique (excld. NA) 1064 1064 1093 2
## Missing values 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE
##
## j.NH3.unit.orig dt.calc dt.diff ct mt cta
## Class character numeric numeric numeric numeric numeric
## Minimum kg N/ha-hr 0.5 0 0.5 0.25 0.5
## Maximum kg NH3/ha-hr 2.53 0 137 135 137
## Mean <NA> 2.08 0 66.9 65.8 67.1
## Unique (excld. NA) 2 5 1 296 301 501
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE TRUE FALSE FALSE FALSE
##
## bta flag.int rain.rate rain.cum wind.2m e.int e.cum
## Class numeric character numeric numeric numeric numeric numeric
## Minimum 0 0 0 0.0517 -0.149 -1.82
## Maximum 134 0 0 2.56 4.9 13.4
## Mean 65 <NA> 0 0 1.07 0.0914 3.93
## Unique (excld. NA) 500 1 1 1 240 1093 1093
## Missing values 0 0 0 0 853 0 0
## Sorted FALSE TRUE TRUE TRUE FALSE FALSE FALSE
##
## e e.rel j.rel pub.info soil.type2 exper2
## Class numeric numeric numeric logical logical logical
## Minimum -1.82 -0.0211 -0.000712 <NA> <NA> <NA>
## Maximum 13.4 0.154 0.0222 <NA> <NA> <NA>
## Mean 3.93 0.0457 0.00058 <NA> <NA> <NA>
## Unique (excld. NA) 1093 1093 1093 0 0 0
## Missing values 0 0 0 1093 1093 1093
## Sorted FALSE FALSE FALSE <NA> <NA> <NA>
##
## rep2 acid meas.tech.orig meas.tech2
## Class logical logical character character
## Minimum <NA> FALSE bLS chamber
## Maximum <NA> TRUE Dynamic chamber micro met
## Mean <NA> 0.585544373284538 TRUE <NA> <NA>
## Unique (excld. NA) 0 2 2 2
## Missing values 1093 0 0 0
## Sorted <NA> FALSE FALSE FALSE
##
## crop.orig app.method.orig incorp.orig
## Class character character character
## Minimum Grass Band spread or trailing hose None
## Maximum Grass Band spread or trailing hose None
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## man.source.orig date.start first.row.int row.plot
## Class character Date numeric numeric
## Minimum Pig 2024-09-18 5 5
## Maximum Pig 2024-09-18 858 21
## Mean <NA> <NA> 504 14.3
## Unique (excld. NA) 1 1 17 17
## Missing values 0 0 0 0
## Sorted TRUE TRUE FALSE FALSE
##
## first.rows ggplotgroup
## Class factor factor
## Minimum Plots 10 Emis. 752 (4.98,10.3]
## Maximum Plots 9 Emis. 699 (15.7,21]
## Mean Plots 19 Emis. 431 (10.3,15.7]
## Unique (excld. NA) 17 3
## Missing values 0 0
## Sorted FALSE FALSE
##