Submitted data error checks
0. Instructions for submitters
Submitters should use this file to check for problems with submitted data. Send either a list of problems or confirmation that everything looks OK to Sasha by email. Be sure to reference the dataset version and file creation date/time when doing so. These are:
## Version: 2.50## [1] "Date/time: 2024-05-30 09:40:03.460406"Each of these html files contains a summary of the data from a single submitted spreadsheet file. The html name is based on the name of the submitted file. Use the details below to check:
- Institute abbreviation, submitter and contributor names
- The plot location(s), using the map zoom and pan features if needed
- For problems in the first sections; “OK” means there are no problems in a particular section, “warning” is something that should be checked (but might be OK), “error” is a problem that needs to be addressed
- For numeric values outside the expected range in the “Value checks” section
- Variables with missing values–are there any missing that you thought you included?
- Plots of flux, cumulative emission over time, and final cumulative emission for strange patterns, unexpectedly high or low values
- Plots of weather data for appropriate differences between plots and expected diurnal or other patterns
- Plots of manure and application data for correct values
Finally, the numeric summary at the end might provide details that can help in pinpointing problems, but typically does not need to be checked.
1. Submitter
| inst.abbrev | submitter | version | date |
|---|---|---|---|
| WUR | Huijsmans, Jan | 1 | 2024-02-22 |
2. Contributors
| contributor | institute |
|---|---|
| ?? | WUR |
3. File and directory names
## [1] "../../data-submitted/03/WUR"## [1] "../../data-submitted/03/WUR/WUR_arable_2024.xlsx"4. Location
## Skipping map because lat/long not provided.5.Keys and codes
Codes in Treatments sheet
## OK## OKCodes in Plots sheet
## OK## OKCodes in Emission sheet
## OK## OKCode merge check (matching project, experiment, field, plot, treatment)
## OK## OK## OK## OK## OK6. Publication info
Check for missing codes
## OK## OKComplete citations given
## OK## OK7. Emission sheet
Duplicated intervals
## OKMissing incorporation time
## OKDelay after application
## bta (cum. time since application began) is not available.Missing or double interval number
## OK
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## OKMissing time between intervals
## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."Measurement method and units
Measurement technique:
| Method | Frequency |
|---|---|
| IHF | 973 |
Measurement technique classification:
| Classification | Frequency |
|---|---|
| micro met | 973 |
Emission units and conversion factors.
| Original unit | Conversion factor applied | Final unit |
|---|---|---|
| kg N/ha-hr | 1 | kg N/ha-hr |
7. Value checks
Check to see if submitted values are within a reasonable range.
Weather
## wind : OK
## rain.rate : OK
## air.temp : OK
## soil.temp : No values to check.
## soil.temp.surf : No values to check.
## air.temp.z : OK
## wind.z : OKManure and application
## man.stor : No values to check.
## man.dm : OK
## man.vs : No values to check.
## man.tkn : No values to check.
## man.tan : OK
## man.tic : No values to check.
## man.ua : No values to check.
## man.vfa : No values to check.
## man.ph : OK
## app.rate : OK
## crop.z : OKEmission
## j.NH3 : OK
## e.int : OK
## e.rel : OK8. Missing values
Check for missing values.
All variables
## Some values missing:
## Table below has number of missing observations by variable:
## pub.id rep plot.area lat long
## 973 973 467 973 973
## topo soil.samp.z clay silt sand
## 973 973 973 973 973
## oc soil.water soil.water.v soil.moist soil.ph
## 973 973 457 973 973
## soil.dens crop.res man.source.det man.bed man.con
## 973 973 973 973 973
## man.trt2 man.trt3 man.stor man.dm man.vs
## 973 973 973 24 973
## man.tkn man.tic man.ua man.vfa man.ph
## 973 973 973 973 529
## app.start app.end time.incorp man.area dist.inj
## 973 973 567 973 973
## furrow.z furrow.w crop.z crop.area lai
## 973 973 470 973 973
## notes.plot app.start.orig app.end.orig t.start t.end
## 964 973 973 973 973
## bg.dl bg.val bg.unit pH.surf soil.temp
## 973 973 973 973 973
## soil.temp.z soil.temp.surf rad MOL ustar
## 973 973 470 973 973
## rl air.pres air.pres.unit rh wind.loc
## 973 973 973 973 973
## far.loc notes.int t.start.orig t.end.orig dt.calc
## 973 972 467 467 973
## dt.diff bta pub.info soil.type2 exper2
## 973 973 973 973 973
## rep2 date.start
## 973 973Application method and measurement method
## OK## OK9. Plots
Calculated cumulative emission
Cumulative emission. Missing values imputed (linear interpolation). Numeric labels show position of data in data file: row in the “Plots” sheet and first row in the “Emission” sheet. Labels in center of the first plot have measurement method, manure source, and application method. The same emission data are plotted a few different ways to facilitate checking for problems, e.g., comparing plot to each other or checking application dates. The same colors should be be used for particular field plots throughout this section.
Final cumulative emission
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Relative versus absolute emission
Flux
Weather data
Manure and application
10. dfsumm summary
Plot-level data
##
## 120 rows and 195 columns
## 120 unique rows
## pub.id proj exper
## Class logical character character
## Minimum <NA> B1990-15 B1990-15
## Maximum <NA> B2011-17 B2011-17
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 0 41 41
## Missing values 120 0 0
## Sorted <NA> TRUE TRUE
##
## cpmid
## Class character
## Minimum D:1.I:WUR.Pr:B1990-15.F:../../data-submitted/03/WUR/WUR_arable_2024.xlsx.E:B1990-15.F:1-Slootdorp.P:1.T:1.R:NA.R2:.T:NA.M:IHFIHF
## Maximum D:1.I:WUR.Pr:B2011-17.F:../../data-submitted/03/WUR/WUR_arable_2024.xlsx.E:B2011-17.F:Slootdorp.P:4.T:4.R:NA.R2:.T:NA.M:IHFIHF
## Mean <NA>
## Unique (excld. NA) 120
## Missing values 0
## Sorted TRUE
##
## field plot rep plot.area lat long
## Class character numeric logical numeric numeric numeric
## Minimum 1-Slootdorp 1 <NA> 1060 <NA> <NA>
## Maximum Slootdorp 82 <NA> 1710 <NA> <NA>
## Mean <NA> 21.1 <NA> 1450 <NA> <NA>
## Unique (excld. NA) 56 55 0 66 0 0
## Missing values 0 0 120 54 120 120
## Sorted FALSE FALSE <NA> FALSE <NA> <NA>
##
## country topo soil.samp.z clay silt sand
## Class character logical logical logical logical logical
## Minimum NL <NA> <NA> <NA> <NA> <NA>
## Maximum NL <NA> <NA> <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 0 0 0 0 0
## Missing values 0 120 120 120 120 120
## Sorted TRUE <NA> <NA> <NA> <NA> <NA>
##
## oc soil.type soil.water soil.water.v soil.moist
## Class logical character logical numeric logical
## Minimum <NA> clay <NA> 9 <NA>
## Maximum <NA> sandy loam <NA> 33.5 <NA>
## Mean <NA> <NA> <NA> 18.7 <NA>
## Unique (excld. NA) 0 3 0 26 0
## Missing values 120 0 120 59 120
## Sorted <NA> FALSE <NA> FALSE <NA>
##
## soil.ph soil.dens crop.res till man.source
## Class logical logical logical character character
## Minimum <NA> <NA> <NA> no dairy
## Maximum <NA> <NA> <NA> yes pig
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 0 2 3
## Missing values 120 120 120 0 0
## Sorted <NA> <NA> <NA> FALSE FALSE
##
## man.source.det man.bed man.con man.trt1 man.trt2 man.trt3
## Class logical logical logical character logical logical
## Minimum <NA> <NA> <NA> None <NA> <NA>
## Maximum <NA> <NA> <NA> None <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 0 1 0 0
## Missing values 120 120 120 0 120 120
## Sorted <NA> <NA> <NA> TRUE <NA> <NA>
##
## man.stor man.dm man.vs man.tkn man.tan man.tic man.ua
## Class logical numeric logical logical numeric logical logical
## Minimum <NA> 3.5 <NA> <NA> 2.4 <NA> <NA>
## Maximum <NA> 15.3 <NA> <NA> 8.1 <NA> <NA>
## Mean <NA> 7.81 <NA> <NA> 4.69 <NA> <NA>
## Unique (excld. NA) 0 61 0 0 52 0 0
## Missing values 120 3 120 120 0 120 120
## Sorted <NA> FALSE <NA> <NA> FALSE <NA> <NA>
##
## man.vfa man.ph app.start app.end app.method
## Class logical numeric POSIXct, POSIXt POSIXct, POSIXt character
## Minimum <NA> 7.2 <NA> <NA> bc
## Maximum <NA> 8.5 <NA> <NA> ts
## Mean <NA> 7.87 <NA> <NA> <NA>
## Unique (excld. NA) 0 13 0 0 4
## Missing values 120 62 120 120 0
## Sorted <NA> FALSE <NA> <NA> FALSE
##
## app.rate app.rate.unit incorp time.incorp man.area
## Class numeric character character numeric logical
## Minimum 12.1 t/ha deep 0.05 <NA>
## Maximum 42.8 t/ha shallow 1.5 <NA>
## Mean 23 <NA> <NA> 0.128 <NA>
## Unique (excld. NA) 113 1 3 3 0
## Missing values 0 0 0 71 120
## Sorted FALSE TRUE FALSE FALSE <NA>
##
## dist.inj furrow.z furrow.w crop crop.z crop.area
## Class logical logical logical character numeric numeric
## Minimum <NA> <NA> <NA> none 0 <NA>
## Maximum <NA> <NA> <NA> wheat 16 <NA>
## Mean <NA> <NA> <NA> <NA> 5.81 <NA>
## Unique (excld. NA) 0 0 0 3 9 0
## Missing values 120 120 120 0 62 120
## Sorted <NA> <NA> <NA> FALSE FALSE <NA>
##
## lai notes.plot row.in.file.plot institute sub.period
## Class logical character numeric character numeric
## Minimum <NA> . 5 WUR 3
## Maximum <NA> . 124 WUR 3
## Mean <NA> <NA> 64.5 <NA> 3
## Unique (excld. NA) 0 1 120 1 1
## Missing values 120 119 0 0 0
## Sorted <NA> TRUE FALSE TRUE TRUE
##
## file treat
## Class character numeric
## Minimum ../../data-submitted/03/WUR/WUR_arable_2024.xlsx 1
## Maximum ../../data-submitted/03/WUR/WUR_arable_2024.xlsx 82
## Mean <NA> 21.1
## Unique (excld. NA) 1 55
## Missing values 0 0
## Sorted TRUE FALSE
##
## meas.tech meas.tech.det app.start.orig app.end.orig
## Class character character logical logical
## Minimum IHF IHF <NA> <NA>
## Maximum IHF IHF <NA> <NA>
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0 0
## Missing values 0 0 120 120
## Sorted TRUE TRUE <NA> <NA>
##
## cpid
## Class character
## Minimum D:1.I:WUR.Pr:B1990-15.F:../../data-submitted/03/WUR/WUR_arable_2024.xlsx.E:B1990-15.F:1-Slootdorp.P:1.T:1.R:NA.R2:.T:NA
## Maximum D:1.I:WUR.Pr:B2011-17.F:../../data-submitted/03/WUR/WUR_arable_2024.xlsx.E:B2011-17.F:Slootdorp.P:4.T:4.R:NA.R2:.T:NA
## Mean <NA>
## Unique (excld. NA) 120
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter
## Class character character character
## Minimum D:1.I:WUR.Pr:B1990-15.E:B1990-15 Huijsmans, Jan
## Maximum D:1.I:WUR.Pr:B2011-17.E:B2011-17 Huijsmans, Jan
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 41 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## tan.app e.1 e.4 e.6 e.12 e.24 e.48
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 45.1 0.027 0.0605 0.0723 0.092 0.109 0.127
## Maximum 235 29.6 86.6 99.5 107 110 117
## Mean 106 6.03 13.5 16.7 19.6 21.9 25.9
## Unique (excld. NA) 118 85 120 120 119 119 105
## Missing values 0 34 0 0 1 1 15
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.72 e.96 e.168 e.final e.tot e.cum.1 e.cum.4
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.145 1.95 <NA> 0.162 0.162 0.027 0.0605
## Maximum 121 99.9 <NA> 125 125 29.6 86.6
## Mean 28.2 24.9 <NA> 28 28 6.03 13.5
## Unique (excld. NA) 95 31 0 120 120 85 120
## Missing values 25 89 120 0 0 34 0
## Sorted FALSE FALSE <NA> FALSE FALSE FALSE FALSE
##
## e.cum.6 e.cum.12 e.cum.24 e.cum.48 e.cum.72 e.cum.96
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.0723 0.092 0.109 0.127 0.145 1.95
## Maximum 99.5 107 110 117 121 99.9
## Mean 16.7 19.6 21.9 25.9 28.2 24.9
## Unique (excld. NA) 120 119 119 105 95 31
## Missing values 0 1 1 15 25 89
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.cum.168 e.cum.final e.cum.tot e.rel.1 e.rel.4 e.rel.6
## Class numeric numeric numeric numeric numeric numeric
## Minimum <NA> 0.162 0.162 0.000129 0.000289 0.000345
## Maximum <NA> 125 125 0.25 0.597 0.693
## Mean <NA> 28 28 0.0613 0.134 0.165
## Unique (excld. NA) 0 120 120 86 120 120
## Missing values 120 0 0 34 0 0
## Sorted <NA> FALSE FALSE FALSE FALSE FALSE
##
## e.rel.12 e.rel.24 e.rel.48 e.rel.72 e.rel.96 e.rel.168
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.000439 0.000522 0.000605 0.00069 0.0283 <NA>
## Maximum 0.745 0.803 0.867 0.894 0.909 <NA>
## Mean 0.193 0.216 0.251 0.278 0.254 <NA>
## Unique (excld. NA) 119 119 105 95 31 0
## Missing values 1 1 15 25 89 120
## Sorted FALSE FALSE FALSE FALSE FALSE <NA>
##
## e.rel.final e.rel.tot rain.1 rain.4 rain.6 rain.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.000772 0.000772 0 0 0 0
## Maximum 0.909 0.909 0 0 0 0
## Mean 0.276 0.276 0 0 0 0
## Unique (excld. NA) 119 119 1 1 1 1
## Missing values 0 0 34 0 0 1
## Sorted FALSE FALSE TRUE TRUE TRUE TRUE
##
## rain.24 rain.48 rain.72 rain.96 rain.168 rain.final rain.tot
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0 0 0 <NA> 0 0
## Maximum 0 0 0 0 <NA> 0 0
## Mean 0 0 0 0 <NA> 0 0
## Unique (excld. NA) 1 1 1 1 0 1 1
## Missing values 1 15 25 89 120 0 0
## Sorted TRUE TRUE TRUE TRUE <NA> TRUE TRUE
##
## air.temp.1 air.temp.4 air.temp.6 air.temp.12 air.temp.24
## Class numeric numeric numeric numeric numeric
## Minimum 4.47 5.61 5.61 7.95 5.37
## Maximum 23.7 25.7 28.6 30.8 24.4
## Mean 13.1 14.2 14.8 15.2 13
## Unique (excld. NA) 71 119 119 120 120
## Missing values 34 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## air.temp.48 air.temp.72 air.temp.96 air.temp.168 air.temp.mn
## Class numeric numeric numeric numeric numeric
## Minimum 2.34 5.19 6.21 6.21 6.21
## Maximum 21.9 21.9 21.9 21.9 21.9
## Mean 12.4 12.3 12.3 12.3 12.3
## Unique (excld. NA) 120 120 120 120 120
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## wind.1 wind.4 wind.6 wind.12 wind.24 wind.48 wind.72
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.7 0.971 0.971 1.41 1.1 1.04 1.11
## Maximum 8 8.58 8.64 8.6 8.31 6.95 7.01
## Mean 4.06 4.12 4.18 4.27 3.52 3.45 3.33
## Unique (excld. NA) 64 118 119 120 120 120 120
## Missing values 34 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## wind.96 wind.168 wind.mn wind.2m.1 wind.2m.4 wind.2m.6
## Class numeric numeric numeric numeric numeric numeric
## Minimum 1.26 1.26 1.26 0.7 0.971 0.971
## Maximum 6.78 6.78 6.78 8 8.58 8.64
## Mean 3.28 3.27 3.27 4.06 4.12 4.18
## Unique (excld. NA) 120 120 120 65 119 119
## Missing values 0 0 0 34 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## wind.2m.12 wind.2m.24 wind.2m.48 wind.2m.72 wind.2m.96
## Class numeric numeric numeric numeric numeric
## Minimum 1.41 1.1 1.04 1.11 1.26
## Maximum 8.6 8.31 6.95 7.01 6.78
## Mean 4.27 3.52 3.45 3.33 3.28
## Unique (excld. NA) 120 120 120 120 120
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## wind.2m.168 wind.2m.mn rad.1 rad.4 rad.6 rad.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 1.26 1.26 13.9 59.4 116 180
## Maximum 6.78 6.78 616 1260 1390 1490
## Mean 3.27 3.27 257 533 595 691
## Unique (excld. NA) 120 120 52 58 58 58
## Missing values 0 0 62 62 62 62
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## rad.24 rad.48 rad.72 rad.96 rad.168 rad.mn rain.rate.1
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 110 108 108 139 158 158 0
## Maximum 945 783 821 925 925 925 0
## Mean 438 341 353 382 387 387 0
## Unique (excld. NA) 58 58 58 58 58 58 1
## Missing values 62 62 62 62 62 62 34
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE TRUE
##
## rain.rate.4 rain.rate.6 rain.rate.12 rain.rate.24
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0 0 0
## Mean 0 0 0 0
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.48 rain.rate.72 rain.rate.96 rain.rate.168
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0 0 0
## Mean 0 0 0 0
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.mn first.row.in.file.int last.row.in.file.int
## Class numeric numeric numeric
## Minimum 0 5 13
## Maximum 0 971 977
## Mean 0 505 512
## Unique (excld. NA) 1 120 120
## Missing values 0 0 0
## Sorted TRUE FALSE FALSE
##
## n.ints dt1 j.rel1 j.NH31 dt.min dt.max ct.min
## Class integer numeric numeric numeric numeric numeric numeric
## Minimum 4 0.3 0.000172 0.0277 0.3 3.05 0.3
## Maximum 9 1.15 0.299 27.7 1.15 33 1.15
## Mean 8.11 0.756 0.0538 5.25 0.756 24.7 0.756
## Unique (excld. NA) 5 17 113 120 17 62 17
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## ct.max t.start.p t.end.p air.temp.z
## Class numeric POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 9.07 <NA> <NA> 1.5
## Maximum 97.7 <NA> <NA> 1.5
## Mean 86.4 <NA> <NA> 1.5
## Unique (excld. NA) 100 0 0 1
## Missing values 0 120 120 0
## Sorted FALSE <NA> <NA> TRUE
##
## soil.temp.z wind.z wind.loc far.loc pub.info soil.type2
## Class logical numeric logical logical logical logical
## Minimum <NA> 2 <NA> <NA> <NA> <NA>
## Maximum <NA> 2 <NA> <NA> <NA> <NA>
## Mean <NA> 2 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 0 0 0 0
## Missing values 120 0 120 120 120 120
## Sorted <NA> TRUE <NA> <NA> <NA> <NA>
##
## exper2 rep2 acid meas.tech.orig meas.tech2 crop.orig
## Class logical logical logical character character character
## Minimum <NA> <NA> FALSE IHF micro met None
## Maximum <NA> <NA> FALSE IHF micro met wheat
## Mean <NA> <NA> 0 TRUE <NA> <NA> <NA>
## Unique (excld. NA) 0 0 1 1 1 3
## Missing values 120 120 0 0 0 0
## Sorted <NA> <NA> TRUE TRUE TRUE FALSE
##
## man.source.orig app.method.orig app.method2 incorp.orig
## Class character character character character
## Minimum dairy Broadcast bc Deep
## Maximum pig Trailing shoe ts Shallow
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 3 4 4 3
## Missing values 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE
##
## date.start
## Class Date
## Minimum <NA>
## Maximum <NA>
## Mean <NA>
## Unique (excld. NA) 0
## Missing values 120
## Sorted <NA>
## Interval-level emission data
##
## 973 rows and 138 columns
## 973 unique rows
## cpmid
## Class character
## Minimum D:1.I:WUR.Pr:B1990-15.F:../../data-submitted/03/WUR/WUR_arable_2024.xlsx.E:B1990-15.F:1-Slootdorp.P:1.T:1.R:NA.R2:.T:NA.M:IHFIHF
## Maximum D:1.I:WUR.Pr:B2011-17.F:../../data-submitted/03/WUR/WUR_arable_2024.xlsx.E:B2011-17.F:Slootdorp.P:4.T:4.R:NA.R2:.T:NA.M:IHFIHF
## Mean <NA>
## Unique (excld. NA) 120
## Missing values 0
## Sorted TRUE
##
## pub.id proj exper field plot rep
## Class logical character character character numeric logical
## Minimum <NA> B1990-15 B1990-15 1-Slootdorp 1 <NA>
## Maximum <NA> B2011-17 B2011-17 Slootdorp 82 <NA>
## Mean <NA> <NA> <NA> <NA> 22 <NA>
## Unique (excld. NA) 0 41 41 56 55 0
## Missing values 973 0 0 0 0 973
## Sorted <NA> TRUE TRUE FALSE FALSE <NA>
##
## treat meas.tech meas.tech.det plot.area lat long
## Class numeric character character numeric numeric numeric
## Minimum 1 IHF IHF 1060 <NA> <NA>
## Maximum 82 IHF IHF 1710 <NA> <NA>
## Mean 22 <NA> <NA> 1460 <NA> <NA>
## Unique (excld. NA) 55 1 1 66 0 0
## Missing values 0 0 0 467 973 973
## Sorted FALSE TRUE TRUE FALSE <NA> <NA>
##
## country topo soil.samp.z clay silt sand
## Class character logical logical logical logical logical
## Minimum NL <NA> <NA> <NA> <NA> <NA>
## Maximum NL <NA> <NA> <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 0 0 0 0 0
## Missing values 0 973 973 973 973 973
## Sorted TRUE <NA> <NA> <NA> <NA> <NA>
##
## oc soil.type soil.water soil.water.v soil.moist
## Class logical character logical numeric logical
## Minimum <NA> clay <NA> 9 <NA>
## Maximum <NA> sandy loam <NA> 33.5 <NA>
## Mean <NA> <NA> <NA> 18.5 <NA>
## Unique (excld. NA) 0 3 0 26 0
## Missing values 973 0 973 457 973
## Sorted <NA> FALSE <NA> FALSE <NA>
##
## soil.ph soil.dens crop.res till man.source
## Class logical logical logical character character
## Minimum <NA> <NA> <NA> no dairy
## Maximum <NA> <NA> <NA> yes pig
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 0 2 3
## Missing values 973 973 973 0 0
## Sorted <NA> <NA> <NA> FALSE FALSE
##
## man.source.det man.bed man.con man.trt1 man.trt2 man.trt3
## Class logical logical logical character logical logical
## Minimum <NA> <NA> <NA> None <NA> <NA>
## Maximum <NA> <NA> <NA> None <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 0 1 0 0
## Missing values 973 973 973 0 973 973
## Sorted <NA> <NA> <NA> TRUE <NA> <NA>
##
## man.stor man.dm man.vs man.tkn man.tan man.tic man.ua
## Class logical numeric logical logical numeric logical logical
## Minimum <NA> 3.5 <NA> <NA> 2.4 <NA> <NA>
## Maximum <NA> 15.3 <NA> <NA> 8.1 <NA> <NA>
## Mean <NA> 7.89 <NA> <NA> 4.66 <NA> <NA>
## Unique (excld. NA) 0 61 0 0 52 0 0
## Missing values 973 24 973 973 0 973 973
## Sorted <NA> FALSE <NA> <NA> FALSE <NA> <NA>
##
## man.vfa man.ph app.start app.end app.method
## Class logical numeric POSIXct, POSIXt POSIXct, POSIXt character
## Minimum <NA> 7.2 <NA> <NA> bc
## Maximum <NA> 8.5 <NA> <NA> ts
## Mean <NA> 7.88 <NA> <NA> <NA>
## Unique (excld. NA) 0 13 0 0 4
## Missing values 973 529 973 973 0
## Sorted <NA> FALSE <NA> <NA> FALSE
##
## app.rate app.rate.unit incorp time.incorp man.area
## Class numeric character character numeric logical
## Minimum 12.1 t/ha deep 0.05 <NA>
## Maximum 42.8 t/ha shallow 1.5 <NA>
## Mean 23.1 <NA> <NA> 0.134 <NA>
## Unique (excld. NA) 113 1 3 3 0
## Missing values 0 0 0 567 973
## Sorted FALSE TRUE FALSE FALSE <NA>
##
## dist.inj furrow.z furrow.w crop crop.z crop.area
## Class logical logical logical character numeric numeric
## Minimum <NA> <NA> <NA> none 0 <NA>
## Maximum <NA> <NA> <NA> wheat 16 <NA>
## Mean <NA> <NA> <NA> <NA> 5.79 <NA>
## Unique (excld. NA) 0 0 0 3 9 0
## Missing values 973 973 973 0 470 973
## Sorted <NA> <NA> <NA> FALSE FALSE <NA>
##
## lai notes.plot row.in.file.plot institute sub.period
## Class logical character numeric character numeric
## Minimum <NA> . 5 WUR 3
## Maximum <NA> . 124 WUR 3
## Mean <NA> <NA> 62.4 <NA> 3
## Unique (excld. NA) 0 1 120 1 1
## Missing values 973 964 0 0 0
## Sorted <NA> TRUE FALSE TRUE TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/WUR/WUR_arable_2024.xlsx
## Maximum ../../data-submitted/03/WUR/WUR_arable_2024.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class logical logical
## Minimum <NA> <NA>
## Maximum <NA> <NA>
## Mean <NA> <NA>
## Unique (excld. NA) 0 0
## Missing values 973 973
## Sorted <NA> <NA>
##
## cpid
## Class character
## Minimum D:1.I:WUR.Pr:B1990-15.F:../../data-submitted/03/WUR/WUR_arable_2024.xlsx.E:B1990-15.F:1-Slootdorp.P:1.T:1.R:NA.R2:.T:NA
## Maximum D:1.I:WUR.Pr:B2011-17.F:../../data-submitted/03/WUR/WUR_arable_2024.xlsx.E:B2011-17.F:Slootdorp.P:4.T:4.R:NA.R2:.T:NA
## Mean <NA>
## Unique (excld. NA) 120
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter
## Class character character character
## Minimum D:1.I:WUR.Pr:B1990-15.E:B1990-15 Huijsmans, Jan
## Maximum D:1.I:WUR.Pr:B2011-17.E:B2011-17 Huijsmans, Jan
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 41 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## tan.app interval t.start t.end dt
## Class numeric numeric POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 45.1 1 <NA> <NA> 0.3
## Maximum 235 9 <NA> <NA> 33
## Mean 106 4.61 <NA> <NA> 10.7
## Unique (excld. NA) 118 9 0 0 315
## Missing values 0 0 973 973 0
## Sorted FALSE FALSE <NA> <NA> FALSE
##
## bg.dl bg.val bg.unit j.NH3 j.NH3.unit pH.surf air.temp
## Class logical logical logical numeric character logical numeric
## Minimum <NA> <NA> <NA> 0 kg N/ha-hr <NA> -0.3
## Maximum <NA> <NA> <NA> 33.8 kg N/ha-hr <NA> 34.1
## Mean <NA> <NA> <NA> 1.79 <NA> <NA> 13.4
## Unique (excld. NA) 0 0 0 967 1 0 512
## Missing values 973 973 973 0 0 973 0
## Sorted <NA> <NA> <NA> FALSE TRUE <NA> FALSE
##
## air.temp.z soil.temp soil.temp.z soil.temp.surf rad
## Class numeric numeric logical logical numeric
## Minimum 1.5 <NA> <NA> <NA> 13.9
## Maximum 1.5 <NA> <NA> <NA> 1800
## Mean 1.5 <NA> <NA> <NA> 481
## Unique (excld. NA) 1 0 0 0 492
## Missing values 0 973 973 973 470
## Sorted TRUE <NA> <NA> <NA> FALSE
##
## wind wind.z MOL ustar rl air.pres
## Class numeric numeric logical logical logical logical
## Minimum 0.5 2 <NA> <NA> <NA> <NA>
## Maximum 9.05 2 <NA> <NA> <NA> <NA>
## Mean 3.71 2 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 559 1 0 0 0 0
## Missing values 0 0 973 973 973 973
## Sorted FALSE TRUE <NA> <NA> <NA> <NA>
##
## air.pres.unit rain rh wind.loc far.loc notes.int
## Class logical numeric logical logical logical character
## Minimum <NA> 0 <NA> <NA> <NA> .
## Maximum <NA> 0 <NA> <NA> <NA> .
## Mean <NA> 0 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 0 0 0 1
## Missing values 973 0 973 973 973 972
## Sorted <NA> TRUE <NA> <NA> <NA> TRUE
##
## row.in.file.int j.type t.start.orig
## Class numeric character character
## Minimum 5 emission rate 1998-09-22T12:24:00Z
## Maximum 977 emission rate 2011-04-24T12:27:00Z
## Mean 491 <NA> <NA>
## Unique (excld. NA) 973 1 503
## Missing values 0 0 467
## Sorted FALSE TRUE FALSE
##
## t.end.orig j.NH3.unit.orig j.NH3.orig
## Class character character numeric
## Minimum 1998-09-22T12:24:00Z kg N/ha-hr 0
## Maximum 2011-04-24T12:27:00Z kg N/ha-hr 33.8
## Mean <NA> <NA> 1.79
## Unique (excld. NA) 503 1 967
## Missing values 467 0 0
## Sorted FALSE TRUE FALSE
##
## j.NH3.conv.fact dt.calc dt.diff ct mt cta
## Class numeric logical numeric numeric numeric numeric
## Minimum 1 <NA> <NA> 0.3 0.15 0.3
## Maximum 1 <NA> <NA> 97.7 89.2 97.7
## Mean 1 <NA> <NA> 27.7 22.4 27.7
## Unique (excld. NA) 1 0 0 541 636 541
## Missing values 0 973 973 0 0 0
## Sorted TRUE <NA> <NA> FALSE FALSE FALSE
##
## bta flag.int rain.rate rain.cum wind.2m e.int e.cum
## Class numeric character numeric numeric numeric numeric numeric
## Minimum <NA> 0 0 0.5 0 0.0139
## Maximum <NA> 0 0 9.05 37.2 125
## Mean <NA> <NA> 0 0 3.71 3.45 18.4
## Unique (excld. NA) 0 1 1 1 567 949 967
## Missing values 973 0 0 0 0 0 0
## Sorted <NA> TRUE TRUE TRUE FALSE FALSE FALSE
##
## e e.rel j.rel pub.info soil.type2 exper2 rep2
## Class numeric numeric numeric logical logical logical logical
## Minimum 0.0139 8.58e-05 0 <NA> <NA> <NA> <NA>
## Maximum 125 0.909 0.299 <NA> <NA> <NA> <NA>
## Mean 18.4 0.182 0.0179 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 967 920 937 0 0 0 0
## Missing values 0 0 0 973 973 973 973
## Sorted FALSE FALSE FALSE <NA> <NA> <NA> <NA>
##
## acid meas.tech.orig meas.tech2 crop.orig man.source.orig
## Class logical character character character character
## Minimum FALSE IHF micro met None dairy
## Maximum FALSE IHF micro met wheat pig
## Mean 0 TRUE <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 3 3
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE FALSE FALSE
##
## app.method.orig app.method2 incorp.orig date.start
## Class character character character Date
## Minimum Broadcast bc Deep <NA>
## Maximum Trailing shoe ts Shallow <NA>
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 4 4 3 0
## Missing values 0 0 0 973
## Sorted FALSE FALSE FALSE <NA>
##
## first.row.int row.plot first.rows ggplotgroup
## Class numeric numeric factor factor
## Minimum 5 5 Plots 10 Emis. 50 (4.88,10.9]
## Maximum 971 124 Plots 99 Emis. 787 (118,124]
## Mean 487 62.4 Plots 45 Emis. 346 (58.6,64.5]
## Unique (excld. NA) 120 120 120 20
## Missing values 0 0 0 0
## Sorted FALSE FALSE FALSE TRUE
##